Heikki Mannila
Professor at Aalto University School of Business

Schools
- Aalto University School of Business
Links
Biography
Aalto University School of Business
Peer-reviewed scientific articles
Journal article-refereed, Original researchSignificance testing of word frequencies in corpora
Lijffijt, Jefrey; Nevalainen, Terttu; Säily, Tanja; Papapetrou, Panagiotis; Puolamäki, Kai; Mannila, Heikki2016 in Digital Scholarship in the Humanities (Oxford University Press)ISSN: 2055-7671Towards computational techniques for identifying candidate chronofauna
Bingham, Ella; Mannila, Heikki2014 in ANNALES ZOOLOGICI FENNICI (Finnish Zoological and Botanical Publishing Board)ISSN: 0003-455XEarly environment and neurobehavioral development predict adult temperament clusters
Congdon, Eliza; Service, Susan; Wessman, Jaana; Seppänen, Jouni K.; Schönauer, Stefan; Miettunen, Jouko; Turunen, Hannu; Koiranen, Markku; Joukamaa, Matti; Järvelin, Marjo-Riitta; Peltonen, Leena; Veijola, Juha; Mannila, Heikki; Paunio, Tiina; Freimer, Nelson B.2012 in PLOS ONE (PUBLIC LIBRARY SCIENCE)ISSN: 1932-6203Convergence in the distribution patterns of Europe's plants and mammals is due to environmental forcing
Heikinheimo, Hannes; Eronen, Jussi T.; Sennikov, Alexander; Preston, Christopher D.; Oikarinen, Emilia; Uotila, Pertti; Mannila, Heikki; Fortelius, Mikael2012 in JOURNAL OF BIOGEOGRAPHY (Wiley-Blackwell)ISSN: 0305-0270Temperament clusters in a normal population Implications for health and disease
Wessman, Jaana; Schönauer, Stefan; Miettunen, Jouko; Turunen, Hannu; Parviainen, Pekka; Seppänen, Jouni K.; Congdon, Eliza; Service, Susan; Koiranen, Markku; Ekelund, Jesper; Laitinen, Jaana; Taanila, Anja; Tammelin, Tuija; Hintsanen, Mirka; Pulkki-Råback, Laura; Keltikangas-Järvinen, Liisa; Viikari, Jorma; Raitakari, Olli T; Joukamaa, Matti; Järvelin, Marjo-Riitta; Freimer, Nelson; Peltonen, Leena; Veijola, Juha; Mannila, Heikki; Paunio, Tiina2012 in PLOS ONE (PUBLIC LIBRARY SCIENCE)ISSN: 1932-6203The effect of scale, climate and environment on species richness and spatial distribution of Finnish birds
Eronen, Jussi T.; Puolamäki, Kai; Heikinheimo, Hannes; Lokki, Heikki; Venäläinen, Ari; Mannila, Heikki; Fortelius, Mikael2011 in ANNALES ZOOLOGICI FENNICI (Finnish Zoological and Botanical Publishing Board)ISSN: 0003-455XBanded structure in binary matrices
Garriga, Gemma C.; Junttila, Esa; Mannila, Heikki2011 in KNOWLEDGE AND INFORMATION SYSTEMS (Springer London)ISSN: 0219-1377Randomization techniques for assessing the significance of gene periodicity results
Kallio, Aleksi; Vuokko, Niko; Ojala, Markus; Haiminen, Niina; Mannila, Heikki2011 in BMC BIOINFORMATICS (BioMed Central)Correlations and Co-Occurrences of Taxa: the Role of Temporal, Geographic and Taxonomic Restrictions
Kallio, Aleksi; Puolamäki, Kai; Fortelius, Mikael; Mannila, Heikki2011 in PALAEONTOLOGIA ELECTRONICA (Texas A & M University)ISSN: 1935-3952The living and the fossilized How well do unevenly distributed points capture the faunal information in a grid?
Saarinen, Juha; Oikarinen, Emilia; Fortelius, Mikael; Mannila, Heikki2010 in EVOLUTIONARY ECOLOGY RESEARCH (Evolutionary Ecology Research)ISSN: 1522-0613Autumn temperature and carbon balance of a boreal Scots pine forest in Southern Finland
Vesala, Timo; Launiainen, Samuli; Kolari, Pasi; Pumpanen, Jukka; Sevanto, Sanna; Hari, Pertti; Nikinmaa, Eero; Kaski, Petteri; Mannila, Heikki; Ukkonen, Esko; Piao, Shilong; Ciais, Philippe2010 in BIOGEOSCIENCES (European Geosciences Union)ISSN: 1726-4170Complexity control in a mixture model by the Hardy-Weinberg equilibrium
Bingham, Ella; Mannila, Heikki2009 in COMPUTATIONAL STATISTICS AND DATA ANALYSIS (Elsevier Science B.V.)ISSN: 0167-9473Approximating the minimum chain completion problem
Feder, Tomás; Mannila, Heikki; Terzi, Evimaria2009 in INFORMATION PROCESSING LETTERS (Elsevier)Clusterings should not be compared by visual inspection: response to GagnE & Proulx
Heikinheimo, H.; Fortelius, M.; Eronen, J.; Mannila, H.2009 in JOURNAL OF BIOGEOGRAPHY (Wiley-Blackwell)ISSN: 0305-0270Lower Extinction Risk in Sleep-or-Hide Mammals
Liow, Lee Hsiang; Fortelius, Mikael; Lintulaakso, Kari; Mannila, Heikki; Stenseth, Nils Chr.2009 in AMERICAN NATURALIST (University of Chicago)ISSN: 0003-0147Determining attributes to maximize visibility of objects
Miah, Muhammed; Das, Gautam; Hristidis, Vagelis; Mannila, Heikki2009 in IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING (IEEE Computer Society)ISSN: 1041-4347Randomization Methods for Assessing Data Analysis Results on Real-Valued Matrices
Ojala, Markus; Vuokko, Niko; Kallio, Aleksi; Haiminen, Niina; Mannila, Heikki2009 in Statistical Analysis and Data Mining (John Wiley and Sons Inc.)A Randomized Approximation Algorithm for Computing Bucket Orders
Ukkonen, Antti; Puolamäki, Kai; Gionis, Aristides; Mannila, Heikki2009 in INFORMATION PROCESSING LETTERS (Elsevier)Mixture Model Clustering of Phenotype Features Reveals Evidence for Association of DTNBP1 to a Specific Subtype of Schizophrenia
Wessman, Jaana; Paunio, Tiina; Tuulio-Henriksson, Annamari; Koivisto, Mikko; Partonen, Timo; Suvisaari, Jaana; Turunen, Joni A.; Wedenoja, Juho; Hennah, William; Pietilainen, Olli P.H.; Lonnqvist, Jouko; Mannila, Heikki; Peltonen, Leena2009 in BIOLOGICAL PSYCHIATRY (Elsevier USA)ISSN: 0006-3223Optimal segmentation using tree models
Gwadera, Robert; Gionis, Aristides; Mannila, Heikki2008 in KNOWLEDGE AND INFORMATION SYSTEMS (Springer London)Determining significance of pairwise co-occurrences of events in bursty sequences
Haiminen, Niina; Mannila, Heikki; Terzi, Evimaria2008 in BMC BIOINFORMATICS (BioMed Central)Reply to Vilar et al.: Sleep or hide, better for survival anytime
Liow, Lee Hsiang; Fortelius, Mikael; Bingham, Ella; Lintulaakso, Kari; Mannila, Heikki; Flynn, Larry; Stenseth, Nils C.2008 in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (NATL ACAD SCIENCES)Higher origination and extinction rates in larger mammals
Liow, L.H.; Fortelius, Mikael; Bingham, E.; Lintulaakso, K.; Mannila, Heikki; Flynn, L.; Stenseth, N.Chr.2008 in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (NATL ACAD SCIENCES)ISSN: 0027-8424Evaluation of HapMap data in six populations of European descent
Lundmark, P.E.; Liljedahl, U.; Boomsma, D.I.; Mannila, Heikki; Martin, N.G.; Palotie, A.; Peltonen, L.; Perola, M.; Spector, T.D.; Syvanen, A.-C.2008 in EUROPEAN JOURNAL OF HUMAN GENETICS (Nature Publishing Group)The Discrete Basis Problem
Miettinen, Pauli; Mielikainen, Taneli; Gionis, Aristides; Das, Gautam; Mannila, Heikki2008 in IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING (IEEE Computer Society)Assessing Data Mining Results via Swap Randomization
Gionis, A.; Mannila, H.; Mielikainen, T.; Tsaparas, P.2007 in ACM Transactions on Knowledge Discovery from Data (Association for Computing Machinery (ACM))Clustering Aggregation (long version)
Gionis, A.; Mannila, H.; Tsaparas, P.2007 in ACM Transactions on Knowledge Discovery from Data (Association for Computing Machinery (ACM))Comparing segmentations by applying randomization techniques
Haiminen, Niina; Mannila, Heikki; Terzi, Evimaria2007 in BMC BIOINFORMATICS (BioMed Central)Discovering isochores by least-squares optimal segmentation
Haiminen, N.; Mannila, H.2007 in GENE (Elsevier Science B.V.)Biogeography of European land mammals shows environmentally distinct and spatially coherent clusters
Heikinheimo, H.; Fortelius, M.; Eronen, J.; Mannila, H.2007 in JOURNAL OF BIOGEOGRAPHY (Wiley-Blackwell)ISSN: 0305-0270How to Handle Small Samples: Bootstrap and Bayesian Methods in the Analysis of Linguistic Change
Hinneburg, A.; Mannila, Heikki; Kaislaniemi, S.; Nevalainen, T.; Raumolin-Brunberg, H.2007 in LITERARY AND LINGUISTIC COMPUTING (Oxford University Press)Constrained hidden Markov models for population-based haplotyping
Landwehr, Niels; Mielikainen, Taneli; Eronen, Lauri; Toivonen, Hannu; Mannila, Heikki2007 in BMC BIOINFORMATICS (BioMed Central)Seriation in Paleontological Data Using Markov Chain Monte Carlo Methods
Puolamäki, Kai; Fortelius, Mikael; Mannila, Heikki2006 in PLOS COMPUTATIONAL BIOLOGY (Public Library of Science)A Look at Aerosol Formation using Data Mining Techniques
Hyvönen, S.; Junninen, H.; Laakso, L.; Dal Maso, M.; Grönholm, T.; Bonn, B.; Keronen, P.; Aalto, P.; Hiltunen, V.; Pohja, T.; Launiainen, S.; Hari, P.; Mannila, H.; Kulmala, M.2005 in ATMOSPHERIC CHEMISTRY AND PHYSICS (European Geosciences Union)Using Markov Chain Monte Carlo and Dynamic Programming for Event Sequence Data
Salmenkivi, M.; Mannila, H.2005 in KNOWLEDGE AND INFORMATION SYSTEMS (Springer London)Discovering All Most Specific Sentences
Gunopulos, D.; Khardon, R.; Mannila, H.; Saluja, S.; Toivonen, H.; Sarma, R.S.2003 in ACM Transactions on Database Systems (Association for Computing Machinery (ACM))Beyond Independence: Probabilistic Methods for Query Approximation on Binary Transaction Data
Pavlov, D.; Mannila, H.; Smyth, P.2003 in IEEE Transactions on Data and Knowledge Engineering (Association for Computing Machinery (ACM))Emerging Scientific Applications in Data Mining
Han, J.; Altman, R.B.; Kumar, V.; Mannila, Heikki; Pregibon, D.2002 in COMMUNICATIONS OF THE ACM (Association for Computing Machinery (ACM))Long-Range Control of Expression in Yeast
Mannila, Heikki; Patrikainen, A.; Seppänen, J.K.; Kere, J.2002 in BIOINFORMATICS (OXFORD UNIV PRESS INC)Expression of Myeloid-Specific Genes in Childhood Acute Lymphoblastic Leukemia -- a cDNA Array Study
Niini, T.; Vettenranta, K.; Hollmén, J.; Larramendy, M.L.; Aalto, Y.; Wikman, H.; Nagy, B.; Seppänen, J.K.; Salvador, A.F.; Mannila, H.; Saarinen-Pihkala, U.M.; Knuutila, S.2002 in LEUKEMIA (Nature Publishing Group)Association Analysis for Quantitative Traits by Data Mining: QHPM
Onkamo, P.; Ollikainen, V.; Sevon, P.; Toivonen, H.T.T.; Mannila, Heikki; Kere, J.2002 in The Annals of Human Genetics (Nature Publishing Group)Genome Segmentation using Piecewise Constant Intensity Models and Reversible Jump MCMC
Salmenkivi, M.; Kere, J.; Mannila, Heikki2002 in BIOINFORMATICS (OXFORD UNIV PRESS INC)ISSN: 1367-4803Investigatory and Analytical Approaches to Differential Gene Expression Profiling in Mantle Cell Lymphoma
Zhu, Y.; Hollmén, J.; Räty, R.; Aalto, Y.; Nagy, B.; Elonen, E.; Kere, J.; Mannila, H.; Franssila, K.; Knuutila, S.2002 in BRITISH JOURNAL OF HAEMATOLOGY (Wiley-Blackwell)Offspring Risk and Sibling Risk for Multilocus Traits
Koivisto, M.; Mannila, Heikki2001 in HUMAN HEREDITY (S. Karger AG)Mining Associations Between Genetic Markers, Phenotypes and Covariates
Sevon, P.; Ollikainen, V.; Onkamo, P.; Toivonen, H.T.T.; Mannila, Heikki; Kere, J.2001 in GENETIC EPIDEMIOLOGY (S. Karger AG)Applying Bayesian Statistics to Organism-based Environmental Reconstruction
Toivonen, H.T.T.; Mannila, Heikki; Korhola, A.; Olander, H.2001 in ECOLOGICAL APPLICATIONS (Ecological Society of America)
Significance testing of word frequencies in corpora
Lijffijt, Jefrey; Nevalainen, Terttu; Säily, Tanja; Papapetrou, Panagiotis; Puolamäki, Kai; Mannila, Heikki
2016 in Digital Scholarship in the Humanities (Oxford University Press)ISSN: 2055-7671
Towards computational techniques for identifying candidate chronofauna
Bingham, Ella; Mannila, Heikki
2014 in ANNALES ZOOLOGICI FENNICI (Finnish Zoological and Botanical Publishing Board)ISSN: 0003-455X
Early environment and neurobehavioral development predict adult temperament clusters
Congdon, Eliza; Service, Susan; Wessman, Jaana; Seppänen, Jouni K.; Schönauer, Stefan; Miettunen, Jouko; Turunen, Hannu; Koiranen, Markku; Joukamaa, Matti; Järvelin, Marjo-Riitta; Peltonen, Leena; Veijola, Juha; Mannila, Heikki; Paunio, Tiina; Freimer, Nelson B.
2012 in PLOS ONE (PUBLIC LIBRARY SCIENCE)ISSN: 1932-6203
Convergence in the distribution patterns of Europe's plants and mammals is due to environmental forcing
Heikinheimo, Hannes; Eronen, Jussi T.; Sennikov, Alexander; Preston, Christopher D.; Oikarinen, Emilia; Uotila, Pertti; Mannila, Heikki; Fortelius, Mikael
2012 in JOURNAL OF BIOGEOGRAPHY (Wiley-Blackwell)ISSN: 0305-0270
Temperament clusters in a normal population Implications for health and disease
Wessman, Jaana; Schönauer, Stefan; Miettunen, Jouko; Turunen, Hannu; Parviainen, Pekka; Seppänen, Jouni K.; Congdon, Eliza; Service, Susan; Koiranen, Markku; Ekelund, Jesper; Laitinen, Jaana; Taanila, Anja; Tammelin, Tuija; Hintsanen, Mirka; Pulkki-Råback, Laura; Keltikangas-Järvinen, Liisa; Viikari, Jorma; Raitakari, Olli T; Joukamaa, Matti; Järvelin, Marjo-Riitta; Freimer, Nelson; Peltonen, Leena; Veijola, Juha; Mannila, Heikki; Paunio, Tiina
2012 in PLOS ONE (PUBLIC LIBRARY SCIENCE)ISSN: 1932-6203
The effect of scale, climate and environment on species richness and spatial distribution of Finnish birds
Eronen, Jussi T.; Puolamäki, Kai; Heikinheimo, Hannes; Lokki, Heikki; Venäläinen, Ari; Mannila, Heikki; Fortelius, Mikael
2011 in ANNALES ZOOLOGICI FENNICI (Finnish Zoological and Botanical Publishing Board)ISSN: 0003-455X
Banded structure in binary matrices
Garriga, Gemma C.; Junttila, Esa; Mannila, Heikki
2011 in KNOWLEDGE AND INFORMATION SYSTEMS (Springer London)ISSN: 0219-1377
Randomization techniques for assessing the significance of gene periodicity results
Kallio, Aleksi; Vuokko, Niko; Ojala, Markus; Haiminen, Niina; Mannila, Heikki
2011 in BMC BIOINFORMATICS (BioMed Central)Correlations and Co-Occurrences of Taxa: the Role of Temporal, Geographic and Taxonomic Restrictions
Kallio, Aleksi; Puolamäki, Kai; Fortelius, Mikael; Mannila, Heikki
2011 in PALAEONTOLOGIA ELECTRONICA (Texas A & M University)ISSN: 1935-3952
The living and the fossilized How well do unevenly distributed points capture the faunal information in a grid?
Saarinen, Juha; Oikarinen, Emilia; Fortelius, Mikael; Mannila, Heikki
2010 in EVOLUTIONARY ECOLOGY RESEARCH (Evolutionary Ecology Research)ISSN: 1522-0613
Autumn temperature and carbon balance of a boreal Scots pine forest in Southern Finland
Vesala, Timo; Launiainen, Samuli; Kolari, Pasi; Pumpanen, Jukka; Sevanto, Sanna; Hari, Pertti; Nikinmaa, Eero; Kaski, Petteri; Mannila, Heikki; Ukkonen, Esko; Piao, Shilong; Ciais, Philippe
2010 in BIOGEOSCIENCES (European Geosciences Union)ISSN: 1726-4170
Complexity control in a mixture model by the Hardy-Weinberg equilibrium
Bingham, Ella; Mannila, Heikki
2009 in COMPUTATIONAL STATISTICS AND DATA ANALYSIS (Elsevier Science B.V.)ISSN: 0167-9473
Approximating the minimum chain completion problem
Feder, Tomás; Mannila, Heikki; Terzi, Evimaria
2009 in INFORMATION PROCESSING LETTERS (Elsevier)Clusterings should not be compared by visual inspection: response to GagnE & Proulx
Heikinheimo, H.; Fortelius, M.; Eronen, J.; Mannila, H.
2009 in JOURNAL OF BIOGEOGRAPHY (Wiley-Blackwell)ISSN: 0305-0270
Lower Extinction Risk in Sleep-or-Hide Mammals
Liow, Lee Hsiang; Fortelius, Mikael; Lintulaakso, Kari; Mannila, Heikki; Stenseth, Nils Chr.
2009 in AMERICAN NATURALIST (University of Chicago)ISSN: 0003-0147
Determining attributes to maximize visibility of objects
Miah, Muhammed; Das, Gautam; Hristidis, Vagelis; Mannila, Heikki
2009 in IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING (IEEE Computer Society)ISSN: 1041-4347
Randomization Methods for Assessing Data Analysis Results on Real-Valued Matrices
Ojala, Markus; Vuokko, Niko; Kallio, Aleksi; Haiminen, Niina; Mannila, Heikki
2009 in Statistical Analysis and Data Mining (John Wiley and Sons Inc.)A Randomized Approximation Algorithm for Computing Bucket Orders
Ukkonen, Antti; Puolamäki, Kai; Gionis, Aristides; Mannila, Heikki
2009 in INFORMATION PROCESSING LETTERS (Elsevier)Mixture Model Clustering of Phenotype Features Reveals Evidence for Association of DTNBP1 to a Specific Subtype of Schizophrenia
Wessman, Jaana; Paunio, Tiina; Tuulio-Henriksson, Annamari; Koivisto, Mikko; Partonen, Timo; Suvisaari, Jaana; Turunen, Joni A.; Wedenoja, Juho; Hennah, William; Pietilainen, Olli P.H.; Lonnqvist, Jouko; Mannila, Heikki; Peltonen, Leena
2009 in BIOLOGICAL PSYCHIATRY (Elsevier USA)ISSN: 0006-3223
Optimal segmentation using tree models
Gwadera, Robert; Gionis, Aristides; Mannila, Heikki
2008 in KNOWLEDGE AND INFORMATION SYSTEMS (Springer London)Determining significance of pairwise co-occurrences of events in bursty sequences
Haiminen, Niina; Mannila, Heikki; Terzi, Evimaria
2008 in BMC BIOINFORMATICS (BioMed Central)Reply to Vilar et al.: Sleep or hide, better for survival anytime
Liow, Lee Hsiang; Fortelius, Mikael; Bingham, Ella; Lintulaakso, Kari; Mannila, Heikki; Flynn, Larry; Stenseth, Nils C.
2008 in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (NATL ACAD SCIENCES)Higher origination and extinction rates in larger mammals
Liow, L.H.; Fortelius, Mikael; Bingham, E.; Lintulaakso, K.; Mannila, Heikki; Flynn, L.; Stenseth, N.Chr.
2008 in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (NATL ACAD SCIENCES)ISSN: 0027-8424
Evaluation of HapMap data in six populations of European descent
Lundmark, P.E.; Liljedahl, U.; Boomsma, D.I.; Mannila, Heikki; Martin, N.G.; Palotie, A.; Peltonen, L.; Perola, M.; Spector, T.D.; Syvanen, A.-C.
2008 in EUROPEAN JOURNAL OF HUMAN GENETICS (Nature Publishing Group)The Discrete Basis Problem
Miettinen, Pauli; Mielikainen, Taneli; Gionis, Aristides; Das, Gautam; Mannila, Heikki
2008 in IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING (IEEE Computer Society)Assessing Data Mining Results via Swap Randomization
Gionis, A.; Mannila, H.; Mielikainen, T.; Tsaparas, P.
2007 in ACM Transactions on Knowledge Discovery from Data (Association for Computing Machinery (ACM))Clustering Aggregation (long version)
Gionis, A.; Mannila, H.; Tsaparas, P.
2007 in ACM Transactions on Knowledge Discovery from Data (Association for Computing Machinery (ACM))Comparing segmentations by applying randomization techniques
Haiminen, Niina; Mannila, Heikki; Terzi, Evimaria
2007 in BMC BIOINFORMATICS (BioMed Central)Discovering isochores by least-squares optimal segmentation
Haiminen, N.; Mannila, H.
2007 in GENE (Elsevier Science B.V.)Biogeography of European land mammals shows environmentally distinct and spatially coherent clusters
Heikinheimo, H.; Fortelius, M.; Eronen, J.; Mannila, H.
2007 in JOURNAL OF BIOGEOGRAPHY (Wiley-Blackwell)ISSN: 0305-0270
How to Handle Small Samples: Bootstrap and Bayesian Methods in the Analysis of Linguistic Change
Hinneburg, A.; Mannila, Heikki; Kaislaniemi, S.; Nevalainen, T.; Raumolin-Brunberg, H.
2007 in LITERARY AND LINGUISTIC COMPUTING (Oxford University Press)Constrained hidden Markov models for population-based haplotyping
Landwehr, Niels; Mielikainen, Taneli; Eronen, Lauri; Toivonen, Hannu; Mannila, Heikki
2007 in BMC BIOINFORMATICS (BioMed Central)Seriation in Paleontological Data Using Markov Chain Monte Carlo Methods
Puolamäki, Kai; Fortelius, Mikael; Mannila, Heikki
2006 in PLOS COMPUTATIONAL BIOLOGY (Public Library of Science)A Look at Aerosol Formation using Data Mining Techniques
Hyvönen, S.; Junninen, H.; Laakso, L.; Dal Maso, M.; Grönholm, T.; Bonn, B.; Keronen, P.; Aalto, P.; Hiltunen, V.; Pohja, T.; Launiainen, S.; Hari, P.; Mannila, H.; Kulmala, M.
2005 in ATMOSPHERIC CHEMISTRY AND PHYSICS (European Geosciences Union)Using Markov Chain Monte Carlo and Dynamic Programming for Event Sequence Data
Salmenkivi, M.; Mannila, H.
2005 in KNOWLEDGE AND INFORMATION SYSTEMS (Springer London)Discovering All Most Specific Sentences
Gunopulos, D.; Khardon, R.; Mannila, H.; Saluja, S.; Toivonen, H.; Sarma, R.S.
2003 in ACM Transactions on Database Systems (Association for Computing Machinery (ACM))Beyond Independence: Probabilistic Methods for Query Approximation on Binary Transaction Data
Pavlov, D.; Mannila, H.; Smyth, P.
2003 in IEEE Transactions on Data and Knowledge Engineering (Association for Computing Machinery (ACM))Emerging Scientific Applications in Data Mining
Han, J.; Altman, R.B.; Kumar, V.; Mannila, Heikki; Pregibon, D.
2002 in COMMUNICATIONS OF THE ACM (Association for Computing Machinery (ACM))Long-Range Control of Expression in Yeast
Mannila, Heikki; Patrikainen, A.; Seppänen, J.K.; Kere, J.
2002 in BIOINFORMATICS (OXFORD UNIV PRESS INC)Expression of Myeloid-Specific Genes in Childhood Acute Lymphoblastic Leukemia -- a cDNA Array Study
Niini, T.; Vettenranta, K.; Hollmén, J.; Larramendy, M.L.; Aalto, Y.; Wikman, H.; Nagy, B.; Seppänen, J.K.; Salvador, A.F.; Mannila, H.; Saarinen-Pihkala, U.M.; Knuutila, S.
2002 in LEUKEMIA (Nature Publishing Group)Association Analysis for Quantitative Traits by Data Mining: QHPM
Onkamo, P.; Ollikainen, V.; Sevon, P.; Toivonen, H.T.T.; Mannila, Heikki; Kere, J.
2002 in The Annals of Human Genetics (Nature Publishing Group)Genome Segmentation using Piecewise Constant Intensity Models and Reversible Jump MCMC
Salmenkivi, M.; Kere, J.; Mannila, Heikki
2002 in BIOINFORMATICS (OXFORD UNIV PRESS INC)ISSN: 1367-4803
Investigatory and Analytical Approaches to Differential Gene Expression Profiling in Mantle Cell Lymphoma
Zhu, Y.; Hollmén, J.; Räty, R.; Aalto, Y.; Nagy, B.; Elonen, E.; Kere, J.; Mannila, H.; Franssila, K.; Knuutila, S.
2002 in BRITISH JOURNAL OF HAEMATOLOGY (Wiley-Blackwell)Offspring Risk and Sibling Risk for Multilocus Traits
Koivisto, M.; Mannila, Heikki
2001 in HUMAN HEREDITY (S. Karger AG)Mining Associations Between Genetic Markers, Phenotypes and Covariates
Sevon, P.; Ollikainen, V.; Onkamo, P.; Toivonen, H.T.T.; Mannila, Heikki; Kere, J.
2001 in GENETIC EPIDEMIOLOGY (S. Karger AG)Applying Bayesian Statistics to Organism-based Environmental Reconstruction
Toivonen, H.T.T.; Mannila, Heikki; Korhola, A.; Olander, H.
2001 in ECOLOGICAL APPLICATIONS (Ecological Society of America)Book section, Chapters in research booksPhasing genotypes using a hidden Markov model
Rastas, Pasi; Koivisto, Mikko; Mannila, Heikki; Ukkonen, Esko2008 Piecewise Constant Modeling of Sequential Data Using Reversible Jump Markov Chain Monte Carlo
Mannila, H.; Salmenkivi, M.2005 Boolean Formulas and Frequent Sets
Seppänen, J.K.; Mannila, H.2005
Phasing genotypes using a hidden Markov model
Rastas, Pasi; Koivisto, Mikko; Mannila, Heikki; Ukkonen, Esko
2008 Piecewise Constant Modeling of Sequential Data Using Reversible Jump Markov Chain Monte Carlo
Mannila, H.; Salmenkivi, M.
2005 Boolean Formulas and Frequent Sets
Seppänen, J.K.; Mannila, H.
2005 Conference proceedingsAnalyzing Word Frequencies in Large Text Corpora using Inter-arrival Times and Bootstrapping
Lijffijt, Jefrey; Papapetrou, Panagiotis; Puolamäki, Kai; Mannila, Heikki2011 ISBN: 978-3-642-23783-6ISSN: 0302-9743A Shapley-value Approach for Influence Attribution
Papapetrou, Panagiotis; Gionis, Aristides; Mannila, Heikki2011 Gaussian Clusters and Noise: An Approach Based on the Minimum Description Length Principle
Luosto, Panu; Kivinen, Jyrki; Mannila, Heikki2010 Evaluating Query Result Significance in Databases via Randomizations
Ojala, Markus; Garriga, Gemma; Gionis, Aristides; Mannila, Heikki2010 Applying electromagnetic field theory concepts to clustering with constraints
Hakkoymaz, Huseyin; Chatzimilioudis, Georgios; Gunopulos, Dimitrios; Mannila, Heikki2009 Tell Me Something I Don't Know: Randomization Strategies for Iterative Data Mining
Hanhijärvi, Sami; Ojala, Markus; Vuokko, Niko; Puolamäki, Kai; Tatti, Nikolaj; Mannila, Heikki2009 Low-entropy set selection
Heikinheimo, Hannes; Vreeken, Jilles; Siebes, Arno; Mannila, Heikki2009 Finding links and initiators: A graph-reconstruction problem
Mannila, Heikki; Terzi, Evimaria2009 Feature Selection in Taxonomies with Applications to Paleontology
Garriga, Gemma C.; Ukkonen, Antti; Mannila, Heikki2008 Banded structure in binary matrices
Garriga, Gemma; Junttila, Esa; Mannila, Heikki2008 Mining Association Rules of Simple Conjunctive Queries
Goethals, Bart; Page, Wim Le; Mannila, Heikki2008 Finding Total and Partial Orders from Data for Seriation
Mannila, Heikki2008 Standing Out in a Crowd: Selecting Attributes for Maximum Visibility
Miah, M.; Hristidis, V.; Das, Gautam; Mannila, Heikki2008 Finding duplicate descriptors: algorithms for redescription mining
Miettinen, Pauli; Gallo, Ariana; Mannila, Heikki2008 Randomization of real-valued matrices for assessing the significance of data mining results
Ojala, Markus; Vuokko, Niko; Kallio, Aleksi; Haiminen, Niina; Mannila, Heikki2008 Macadamia: Master's Programme in Machine Learning and Data Mining
Raiko, Tapani; Puolamäki, Kai; Karhunen, Juha; Hollmén, Jaakko; Honkela, Antti; Kaski, Samuel; Mannila, Heikki; Oja, Erkki; Simula, Olli2008 A Random Walk Approach to Sampling Hidden Databases
Dasgupta, A.; Das, G.; Mannila, H.2007 Finding low-entropy sets and trees from binary data
Heikinheimo, Hannes; Hinkkanen, Eino; Mannila, Heikki; Mielikäinen, Taneli; Seppänen, Jouni K.2007 Recurrent predictive models for sequence segmentation
Hyvonen, S.; Gionis, A.; Mannila, H.2007 Nestedness and segmented nestedness
Mannila, H.; Terzi, E.2007 Finding outlying items in sets of partial rankings
Ukkonen, Antti; Mannila, Heikki2007 Segmentation and Dimensionality Reduction
Bingham, E.; Gionis, A.; Haiminen, N.; Hiisilä, H.; Mannila, H.; Terzi, E.2006 Algorithms for Discovering Bucket Orders from Data
Gionis, Aristides; Mannila, Heikki; Puolamäki, Kai; Ukkonen, Antti2006 Assessing Data Mining Results via Swap Randomization
Gionis, A.; Mannila, H.; Mielikäinen, T.; Tsaparas, P.2006 Optimal Segmentation using Tree Models
Gwadera, R.; Gionis, A.; Mannila, H.2006 Finding Trees from Unordered 0-1 Data
Heikinheimo, Hannes; Mannila, Heikki; Seppänen, Jouni K.2006 ISBN: 3-540-45374-1ISSN: 0302-9743Constrained Hidden Markov Models for Population-based Haplotyping
Landwehr, N.; Mielikäinen, T.; Eronen, L.; Toivonen, H.; Mannila, H.2006 The Discrete Basis Problem
Miettinen, P.; Mielikäinen, T.; Gionis, A.; Das, G.; Mannila, H.2006 Analysis of Linux evolution using aligned source code segments
Rasinen, Antti; Hollmén, Jaakko; Mannila, Heikki2006 ISBN: 978-3-540-46491-4What is the dimension of your binary data?
Tatti, N.; Mielikänen, T.; Gionis, A.; Mannila, H.2006 Mining Chains of Relations
Afrati, F.; Das, G.; Gionis, A.; Mannila, H.; Mielikäinen, T.; Tsaparas, P.2005 Clustering Aggregation
Gionis, A.; Mannila, H.; Tsaparas, P.2005 Parameter-Free Spatial Data Mining Using MDL
Papadimitriou, S.; Gionis, A.; Tsaparas, P.; Vaisanen, R.A.; Mannila, H.; Faloutsos, C.2005 A Hidden Markov Technique for Haplotype Reconstruction
Rastas, P.; Koivisto, M.; Mannila, H.; Ukkonen, E.2005 Finding Partial Orders from Unordered 0-1 Data
Ukkonen, A.; Fortelius, M.; Mannila, H.2005 Approximating a Collection of Frequent Sets
Afrati, F.; Gionis, A.; Mannila, H.2004 Relational Link-Based Ranking
Geerts, F.; Mannila, H.; Terzi, E.2004 Geometric and Combinatorial Tiles in 0-1 Data
Gionis, A.; Mannila, H.; Seppänen, J.K.2004 Clustered Segmentations
Gionis, A.; Mannila, H.; Terzi, E.2004 Subspace Clustering of Binary Data - A Probabilistic Approach
Patrikainen, A.; Mannila, H.2004 Dense Itemsets
Seppänen, J.; Mannila, H.2004 Fragments of Order
Gionis, A.; Kujala, T.; Mannila, Heikki2003 Finding Recurrent Sources in Sequences
Gionis, A.; Mannila, Heikki2003 Mixture Models and Frequent Sets: Combining Global and Local Methods for 0-1 Data
Hollmén, Jaakko; Seppänen, J.K.; Mannila, H.2003 Rule Discovery and Probabilistic Modeling for Onomastic Data
Leino, A.; Mannila, H.; Pitkänen, R.-L.2003 The Pattern Ordering Problem
Mielikäinen, T.; Mannila, Heikki2003 A Simple Algorithm for Topic Identification in 0-1 Data
Seppänen, Jouni K.; Bingham, Ella; Mannila, H.2003 A Theory of Inductive Query Answering
de Raedt, L.; Jaeger, M.; Lee, S.D.; Mannila, Heikki2002 An MDL Method for Finding Haplotype Blocks and for Estimating the Strength of Haplotype Block Boundaries
Koivisto, M.; Perola, M.; Varilo, T.; Hennah, W.; Ekelund, J.; Lukk, M.; Peltonen, L.; Ukkonen, E.; Mannila, Heikki2002 OSSM: A Segmentation Approach to Optimize Frequency Counting
Leung, C.K.; Ng, R.; Mannila, Heikki2002 Global and Local Methods in Data Mining: Basic Techniques and Open Problems
Mannila, Heikki2002 Probabilistic Modeling of Transaction Data with Applications to Profiling, Visualization, and Prediction
Cadez, I.; Smyth, P.; Mannila, Heikki2001 Time-Series Segmentation for Context Recognition in Mobile Devices
Himberg, J.; Korpiaho, K.; Mannila, Heikki; Tikanmäki, J.; Toivonen, H.2001 Finding Similar Situations in Sequences of Events via Random Projections
Mannila, Heikki; Seppänen, J.K.2001 Decomposition of Event Sequences into Independent Components
Mannila, Heikki; Rusakov, D.2001
Analyzing Word Frequencies in Large Text Corpora using Inter-arrival Times and Bootstrapping
Lijffijt, Jefrey; Papapetrou, Panagiotis; Puolamäki, Kai; Mannila, Heikki
2011 ISBN: 978-3-642-23783-6
ISSN: 0302-9743
A Shapley-value Approach for Influence Attribution
Papapetrou, Panagiotis; Gionis, Aristides; Mannila, Heikki
2011 Gaussian Clusters and Noise: An Approach Based on the Minimum Description Length Principle
Luosto, Panu; Kivinen, Jyrki; Mannila, Heikki
2010 Evaluating Query Result Significance in Databases via Randomizations
Ojala, Markus; Garriga, Gemma; Gionis, Aristides; Mannila, Heikki
2010 Applying electromagnetic field theory concepts to clustering with constraints
Hakkoymaz, Huseyin; Chatzimilioudis, Georgios; Gunopulos, Dimitrios; Mannila, Heikki
2009 Tell Me Something I Don't Know: Randomization Strategies for Iterative Data Mining
Hanhijärvi, Sami; Ojala, Markus; Vuokko, Niko; Puolamäki, Kai; Tatti, Nikolaj; Mannila, Heikki
2009 Low-entropy set selection
Heikinheimo, Hannes; Vreeken, Jilles; Siebes, Arno; Mannila, Heikki
2009 Finding links and initiators: A graph-reconstruction problem
Mannila, Heikki; Terzi, Evimaria
2009 Feature Selection in Taxonomies with Applications to Paleontology
Garriga, Gemma C.; Ukkonen, Antti; Mannila, Heikki
2008 Banded structure in binary matrices
Garriga, Gemma; Junttila, Esa; Mannila, Heikki
2008 Mining Association Rules of Simple Conjunctive Queries
Goethals, Bart; Page, Wim Le; Mannila, Heikki
2008 Finding Total and Partial Orders from Data for Seriation
Mannila, Heikki
2008 Standing Out in a Crowd: Selecting Attributes for Maximum Visibility
Miah, M.; Hristidis, V.; Das, Gautam; Mannila, Heikki
2008 Finding duplicate descriptors: algorithms for redescription mining
Miettinen, Pauli; Gallo, Ariana; Mannila, Heikki
2008 Randomization of real-valued matrices for assessing the significance of data mining results
Ojala, Markus; Vuokko, Niko; Kallio, Aleksi; Haiminen, Niina; Mannila, Heikki
2008 Macadamia: Master's Programme in Machine Learning and Data Mining
Raiko, Tapani; Puolamäki, Kai; Karhunen, Juha; Hollmén, Jaakko; Honkela, Antti; Kaski, Samuel; Mannila, Heikki; Oja, Erkki; Simula, Olli
2008 A Random Walk Approach to Sampling Hidden Databases
Dasgupta, A.; Das, G.; Mannila, H.
2007 Finding low-entropy sets and trees from binary data
Heikinheimo, Hannes; Hinkkanen, Eino; Mannila, Heikki; Mielikäinen, Taneli; Seppänen, Jouni K.
2007 Recurrent predictive models for sequence segmentation
Hyvonen, S.; Gionis, A.; Mannila, H.
2007 Nestedness and segmented nestedness
Mannila, H.; Terzi, E.
2007 Finding outlying items in sets of partial rankings
Ukkonen, Antti; Mannila, Heikki
2007 Segmentation and Dimensionality Reduction
Bingham, E.; Gionis, A.; Haiminen, N.; Hiisilä, H.; Mannila, H.; Terzi, E.
2006 Algorithms for Discovering Bucket Orders from Data
Gionis, Aristides; Mannila, Heikki; Puolamäki, Kai; Ukkonen, Antti
2006 Assessing Data Mining Results via Swap Randomization
Gionis, A.; Mannila, H.; Mielikäinen, T.; Tsaparas, P.
2006 Optimal Segmentation using Tree Models
Gwadera, R.; Gionis, A.; Mannila, H.
2006 Finding Trees from Unordered 0-1 Data
Heikinheimo, Hannes; Mannila, Heikki; Seppänen, Jouni K.
2006 ISBN: 3-540-45374-1
ISSN: 0302-9743
Constrained Hidden Markov Models for Population-based Haplotyping
Landwehr, N.; Mielikäinen, T.; Eronen, L.; Toivonen, H.; Mannila, H.
2006 The Discrete Basis Problem
Miettinen, P.; Mielikäinen, T.; Gionis, A.; Das, G.; Mannila, H.
2006 Analysis of Linux evolution using aligned source code segments
Rasinen, Antti; Hollmén, Jaakko; Mannila, Heikki
2006 ISBN: 978-3-540-46491-4
What is the dimension of your binary data?
Tatti, N.; Mielikänen, T.; Gionis, A.; Mannila, H.
2006 Mining Chains of Relations
Afrati, F.; Das, G.; Gionis, A.; Mannila, H.; Mielikäinen, T.; Tsaparas, P.
2005 Clustering Aggregation
Gionis, A.; Mannila, H.; Tsaparas, P.
2005 Parameter-Free Spatial Data Mining Using MDL
Papadimitriou, S.; Gionis, A.; Tsaparas, P.; Vaisanen, R.A.; Mannila, H.; Faloutsos, C.
2005 A Hidden Markov Technique for Haplotype Reconstruction
Rastas, P.; Koivisto, M.; Mannila, H.; Ukkonen, E.
2005 Finding Partial Orders from Unordered 0-1 Data
Ukkonen, A.; Fortelius, M.; Mannila, H.
2005 Approximating a Collection of Frequent Sets
Afrati, F.; Gionis, A.; Mannila, H.
2004 Relational Link-Based Ranking
Geerts, F.; Mannila, H.; Terzi, E.
2004 Geometric and Combinatorial Tiles in 0-1 Data
Gionis, A.; Mannila, H.; Seppänen, J.K.
2004 Clustered Segmentations
Gionis, A.; Mannila, H.; Terzi, E.
2004 Subspace Clustering of Binary Data - A Probabilistic Approach
Patrikainen, A.; Mannila, H.
2004 Dense Itemsets
Seppänen, J.; Mannila, H.
2004 Fragments of Order
Gionis, A.; Kujala, T.; Mannila, Heikki
2003 Finding Recurrent Sources in Sequences
Gionis, A.; Mannila, Heikki
2003 Mixture Models and Frequent Sets: Combining Global and Local Methods for 0-1 Data
Hollmén, Jaakko; Seppänen, J.K.; Mannila, H.
2003 Rule Discovery and Probabilistic Modeling for Onomastic Data
Leino, A.; Mannila, H.; Pitkänen, R.-L.
2003 The Pattern Ordering Problem
Mielikäinen, T.; Mannila, Heikki
2003 A Simple Algorithm for Topic Identification in 0-1 Data
Seppänen, Jouni K.; Bingham, Ella; Mannila, H.
2003 A Theory of Inductive Query Answering
de Raedt, L.; Jaeger, M.; Lee, S.D.; Mannila, Heikki
2002 An MDL Method for Finding Haplotype Blocks and for Estimating the Strength of Haplotype Block Boundaries
Koivisto, M.; Perola, M.; Varilo, T.; Hennah, W.; Ekelund, J.; Lukk, M.; Peltonen, L.; Ukkonen, E.; Mannila, Heikki
2002 OSSM: A Segmentation Approach to Optimize Frequency Counting
Leung, C.K.; Ng, R.; Mannila, Heikki
2002 Global and Local Methods in Data Mining: Basic Techniques and Open Problems
Mannila, Heikki
2002 Probabilistic Modeling of Transaction Data with Applications to Profiling, Visualization, and Prediction
Cadez, I.; Smyth, P.; Mannila, Heikki
2001 Time-Series Segmentation for Context Recognition in Mobile Devices
Himberg, J.; Korpiaho, K.; Mannila, Heikki; Tikanmäki, J.; Toivonen, H.
2001 Finding Similar Situations in Sequences of Events via Random Projections
Mannila, Heikki; Seppänen, J.K.
2001 Decomposition of Event Sequences into Independent Components
Mannila, Heikki; Rusakov, D.
2001 Non-refereed scientific articles
Book sectionOn the Applicability of Latent Variable Modeling to Research System Data
Bingham, Ella; Mannila, Heikki2015 ISBN: 978-0-12-802806-3
On the Applicability of Latent Variable Modeling to Research System Data
Bingham, Ella; Mannila, Heikki
2015 ISBN: 978-0-12-802806-3
Scientific books (monographs)
BookPrinciples of Data Mining
Hand, D.; Mannila, Heikki; Smyth, P.2001
Principles of Data Mining
Hand, D.; Mannila, Heikki; Smyth, P.
2001 Book (editor)Discovery Science - Proceedings of the 14th International Conference (DS 2011)
Elomaa, Tapio; Hollmen, Jaakko; Mannila, Heikki2011 ISBN: 978-3-642-24476-6Algorithms and Applications: Essays Dedicated to Esko Ukkonen on the Occasion of His 60th Birthday
Elomaa, Tapio; Mannila, Heikki; Orponen, Pekka2010 Constraint-Based Mining and Inductive Databases, Springer-Verlag LNCS Volume 3848
Boulicaut, J.-F.; de Raedt, L.; Mannila, H.2005 ISBN: 3-540-31331-1ECML 2002 - 12th European Conference on Machine Learning, LNCS 2430
Elomaa, T.; Mannila, Heikki; Toivonen, H.2002 Principles of Data Mining and Knowledge Discovery - 6th European Conference, PKDD 2002, LNCS 2431
Elomaa, T.; Mannila, Heikki; Toivonen, H.2002 Proceedings of the Second SIAM International Conference on Data Mining, SIAM 2002
Grossman, R.; Han, J.; Kumar, V.; Mannila, Heikki; Motwani, R.2002 ISBN: 0-89871-517-2
Discovery Science - Proceedings of the 14th International Conference (DS 2011)
Elomaa, Tapio; Hollmen, Jaakko; Mannila, Heikki
2011 ISBN: 978-3-642-24476-6
Algorithms and Applications: Essays Dedicated to Esko Ukkonen on the Occasion of His 60th Birthday
Elomaa, Tapio; Mannila, Heikki; Orponen, Pekka
2010 Constraint-Based Mining and Inductive Databases, Springer-Verlag LNCS Volume 3848
Boulicaut, J.-F.; de Raedt, L.; Mannila, H.
2005 ISBN: 3-540-31331-1
ECML 2002 - 12th European Conference on Machine Learning, LNCS 2430
Elomaa, T.; Mannila, Heikki; Toivonen, H.
2002 Principles of Data Mining and Knowledge Discovery - 6th European Conference, PKDD 2002, LNCS 2431
Elomaa, T.; Mannila, Heikki; Toivonen, H.
2002 Proceedings of the Second SIAM International Conference on Data Mining, SIAM 2002
Grossman, R.; Han, J.; Kumar, V.; Mannila, Heikki; Motwani, R.
2002 ISBN: 0-89871-517-2
Publications intended for professional communities
Published development or research reportLinkage disequilibrium between chromosomes in the human genome: Test statistics and rapid computation
Bingham, Ella; Koivisto, Mikko; Leino, Yrjö; Mannila, Heikki2010 Topics in 0-1 Data
Bingham, Ella; Mannila, H.; Seppänen, J.K.2002 Nonnegative Matrix Factorization on Gene Expression Data
Seppänen, Jouni; Hollmén, J.; Bingham, E.; Mannila, H.2002 Random Projection in Dimensionality Reduction: Applications to Image and Text Data
Bingham, Ella; Mannila, H.2001 Finding Simple Intensity Descriptions from Event Sequence Data
Mannila, Heikki; Salmenkivi, M.2001
Linkage disequilibrium between chromosomes in the human genome: Test statistics and rapid computation
Bingham, Ella; Koivisto, Mikko; Leino, Yrjö; Mannila, Heikki
2010 Topics in 0-1 Data
Bingham, Ella; Mannila, H.; Seppänen, J.K.
2002 Nonnegative Matrix Factorization on Gene Expression Data
Seppänen, Jouni; Hollmén, J.; Bingham, E.; Mannila, H.
2002 Random Projection in Dimensionality Reduction: Applications to Image and Text Data
Bingham, Ella; Mannila, H.
2001 Finding Simple Intensity Descriptions from Event Sequence Data
Mannila, Heikki; Salmenkivi, M.
2001 Audiovisual material, ICT software
ICT programs or applicationsSeriation in paleontological data using Markov chain Monte Carlo methods
Puolamäki, Kai; Fortelius, Mikael; Mannila, Heikki2006
Seriation in paleontological data using Markov chain Monte Carlo methods
Puolamäki, Kai; Fortelius, Mikael; Mannila, Heikki
2006 Videos
Read about executive education
Other experts
Looking for an expert?
Contact us and we'll find the best option for you.